Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033247Uncharacterized protein. (1357 aa)    
Predicted Functional Partners:
ENSACLP00000029644
Low density lipoprotein receptor adaptor protein 1b.
    
 0.886
LOC113023685
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.812
ENSACLP00000021370
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.812
LOC113035053
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.808
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.797
ENSACLP00000041064
Apolipoprotein Eb.
    
 0.781
wnt1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.749
ENSACLP00000019271
Agrin.
    
 0.718
LOC113014738
Low density lipoprotein receptor adaptor protein 1a.
    
 0.705
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.699
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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