STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003233Polypyrimidine tract binding protein 2b. (501 aa)    
Predicted Functional Partners:
raver2
Ribonucleoprotein, PTB-binding 2.
   
 0.872
LOC113025582
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.868
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.868
LOC113030026
Uncharacterized protein.
   
 0.794
hnrnpll
Uncharacterized protein.
   
 0.794
ENSACLP00000019619
Uncharacterized protein.
   
 0.794
ENSACLP00000022605
Heterogeneous nuclear ribonucleoprotein L.
   
 0.794
ENSACLP00000001445
RRM domain-containing protein.
   
 0.789
ENSACLP00000008415
RRM domain-containing protein.
   
 0.789
LOC113018261
RRM domain-containing protein.
   
 0.789
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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