Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nck2Cytoplasmic protein. (398 aa)    
Predicted Functional Partners:
ENSACLP00000039790
WAS/WASL interacting protein family, member 1a.
    
 0.978
PAK2
Non-specific serine/threonine protein kinase.
    
 0.972
pak2
Non-specific serine/threonine protein kinase.
    
 0.972
pak1
Non-specific serine/threonine protein kinase.
    
 0.964
PAK3
Non-specific serine/threonine protein kinase.
    
 0.964
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.950
pak4
Non-specific serine/threonine protein kinase.
    
 0.947
ENSACLP00000023365
Non-specific serine/threonine protein kinase.
    
 0.945
pak5
Non-specific serine/threonine protein kinase.
    
 0.945
LOC113012314
Non-specific serine/threonine protein kinase.
    
 0.936
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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