STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap298Cilia and flagella associated protein 298. (333 aa)    
Predicted Functional Partners:
cfap300
Cilia and flagella associated protein 300.
    
 
 0.571
zmynd10
Zinc finger, MYND-type containing 10.
    
 
 0.548
wdr92
WD repeat domain 92.
  
   
 0.544
dnaaf1
Dynein assembly factor 1, axonemal.
      
 0.537
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.537
cfap20
Cilia and flagella associated protein 20.
      
 0.536
dnaaf4
Dynein axonemal assembly factor 4.
      
 0.535
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.534
ENSACLP00000035006
Leucine rich repeat containing 6.
      
 0.534
dnali1
Dynein, axonemal, light intermediate chain 1.
  
   
 0.468
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.