Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
onecut2One cut domain family member. (503 aa)    
Predicted Functional Partners:
WDR7
WD repeat domain 7.
      
 0.904
LOC113026082
Cyclin G2; Belongs to the cyclin family.
    
 
 0.747
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.747
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.734
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
      
 0.715
LOC113023444
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
      
 0.676
ENSACLP00000004101
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.665
ENSACLP00000029884
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.665
syk
Tyrosine-protein kinase.
      
 0.663
rpl32
Ribosomal protein L32.
      
 0.660
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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