Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000003275Bromodomain and WD repeat domain containing 1. (1628 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.864
ENSACLP00000035637
UBX domain-containing protein 7.
   
 0.842
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.813
cul4b
Cullin 4B; Belongs to the cullin family.
   
 
 0.704
ENSACLP00000035328
Cullin 4A; Belongs to the cullin family.
   
 
 0.704
ENSACLP00000009671
OFD1 centriole and centriolar satellite protein.
    
 
 0.692
ENSACLP00000006066
BUB3 mitotic checkpoint protein.
   
 0.687
ENSACLP00000026842
Centromere protein J.
    
 
 0.666
ENSACLP00000000383
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
   
 0.663
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.663
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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