Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003287Synaptojanin 1. (1665 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
    
 
 0.961
ENSACLP00000012873
SH3 domain-containing protein.
    
 
 0.961
ENSACLP00000014175
Intersectin 2b.
    
 
 0.961
LOC113031398
SAC domain-containing protein.
    
 0.954
LOC113014101
SAC1 like phosphatidylinositide phosphatase a.
    
 0.954
ENSACLP00000005654
Sorting nexin.
   
 
 0.926
LOC113037518
Sorting nexin.
   
 
 0.926
ENSACLP00000038375
SH3-domain GRB2-like 3a.
    
 
 0.926
sh3gl1
SH3-domain GRB2-like 1b.
    
 
 0.925
ENSACLP00000003604
Inositol polyphosphate-4-phosphatase type I Aa.
     
 0.921
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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