STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd12bHydrolase_4 domain-containing protein. (324 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.852
LOC113016539
Sterol carrier protein 2b.
     
 0.852
lypla1
Lysophospholipase 1.
     
 0.592
lypla2
Lysophospholipase 2.
     
 0.592
acot8
Acyl-CoA thioesterase 8.
     
 0.554
stoml1
Stomatin (EPB72)-like 1.
  
 0.513
ENSACLP00000010861
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 
 0.502
aamdc
Adipogenesis associated, Mth938 domain containing.
     
 0.492
LOC113018431
Thioesterase superfamily member 4.
     
 0.492
LOC113018431-2
Acyl-coenzyme A thioesterase THEM4-like.
     
 0.492
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.