NT5C3B protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

NT5C3B

5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family. (258 aa)

Predicted Functional Partners:

NT5M

0.917

LOC113011833

0.899

LOC113014382

0.899

LOC113034694

0.891

ENSACLP00000027349

0.891

LOC113025818

0.891

ENSACLP00000018361

0.886

LOC113006691

0.886

CMPK1

0.881

cmpk2

0.880

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMPK1	ENSACLP00000018361	ENSACLP00000014524	ENSACLP00000018361	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein.	0.872
CMPK1	ENSACLP00000027349	ENSACLP00000014524	ENSACLP00000027349	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase, cytosolic IIb.	0.877
CMPK1	LOC113006691	ENSACLP00000014524	ENSACLP00000035269	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	0.872
CMPK1	LOC113011833	ENSACLP00000014524	ENSACLP00000006301	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase, cytosolic IAb.	0.884
CMPK1	LOC113014382	ENSACLP00000014524	ENSACLP00000018636	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase, cytosolic IAa.	0.884
CMPK1	LOC113025818	ENSACLP00000014524	ENSACLP00000027913	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase, cytosolic II, like 1.	0.877
CMPK1	LOC113034694	ENSACLP00000014524	ENSACLP00000007148	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase, cytosolic IIa.	0.877
CMPK1	NT5C3B	ENSACLP00000014524	ENSACLP00000003325	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.	0.881
CMPK1	NT5M	ENSACLP00000014524	ENSACLP00000031415	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	5',3'-nucleotidase, mitochondrial.	0.881
CMPK1	cmpk2	ENSACLP00000014524	ENSACLP00000026881	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.	0.969
ENSACLP00000018361	CMPK1	ENSACLP00000018361	ENSACLP00000014524	Uncharacterized protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.872
ENSACLP00000018361	ENSACLP00000027349	ENSACLP00000018361	ENSACLP00000027349	Uncharacterized protein.	5'-nucleotidase, cytosolic IIb.	0.857
ENSACLP00000018361	LOC113006691	ENSACLP00000018361	ENSACLP00000035269	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	0.872
ENSACLP00000018361	LOC113011833	ENSACLP00000018361	ENSACLP00000006301	Uncharacterized protein.	5'-nucleotidase, cytosolic IAb.	0.883
ENSACLP00000018361	LOC113014382	ENSACLP00000018361	ENSACLP00000018636	Uncharacterized protein.	5'-nucleotidase, cytosolic IAa.	0.883
ENSACLP00000018361	LOC113025818	ENSACLP00000018361	ENSACLP00000027913	Uncharacterized protein.	5'-nucleotidase, cytosolic II, like 1.	0.857
ENSACLP00000018361	LOC113034694	ENSACLP00000018361	ENSACLP00000007148	Uncharacterized protein.	5'-nucleotidase, cytosolic IIa.	0.857
ENSACLP00000018361	NT5C3B	ENSACLP00000018361	ENSACLP00000003325	Uncharacterized protein.	5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.	0.886
ENSACLP00000018361	NT5M	ENSACLP00000018361	ENSACLP00000031415	Uncharacterized protein.	5',3'-nucleotidase, mitochondrial.	0.882
ENSACLP00000018361	cmpk2	ENSACLP00000018361	ENSACLP00000026881	Uncharacterized protein.	Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.	0.872