Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003354POU domain protein. (252 aa)    
Predicted Functional Partners:
ENSACLP00000008281
HNF1 homeobox Ba.
   
 
 0.729
NPAS3
Neuronal PAS domain protein 3.
    
 0.637
npas1
Neuronal PAS domain protein 1.
    
 0.637
c14h11orf53
Si:ch211-213d14.1.
    
 
 0.632
pou4f3
POU domain protein.
    
 
 0.585
ENSACLP00000033648
POU domain protein.
    
 
 0.585
LOC113030512
POU domain protein.
    
 
 0.585
pou4f2
POU domain protein.
    
 
 0.585
LOC113017509
SRY-box transcription factor 19b.
   
 0.581
snapc4
Uncharacterized protein.
    
  0.551
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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