Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GREM1Gremlin 1, DAN family BMP antagonist. (137 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
     
 0.895
bmp6
Bone morphogenetic protein 6; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.894
LOC113036990
Bone morphogenetic protein 16.
     
 0.889
bmp2
Bone morphogenetic protein 2b.
     
 0.889
LOC113022850
Bone morphogenetic protein 7a.
     
 0.882
bmp8a
Bone morphogenetic protein 8a.
     
 0.881
gdf5
Growth differentiation factor 5.
     
 0.876
LOC113032230
Growth differentiation factor 6a.
     
 0.876
ENSACLP00000025423
Growth differentiation factor 7.
     
 0.874
ENSACLP00000025583
Growth differentiation factor 7.
     
 0.874
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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