STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GREM1Gremlin 1, DAN family BMP antagonist. (137 aa)    
Predicted Functional Partners:
gdf5
Growth differentiation factor 5.
    
  0.969
LOC113032230
Growth differentiation factor 6a.
    
  0.969
bmp6
Bone morphogenetic protein 6; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.880
bmp4
Bone morphogenetic protein 4.
    
 0.860
LOC113036990
Bone morphogenetic protein 16.
    
 0.860
bmp2
Bone morphogenetic protein 2b.
    
 0.860
bmp8a
Bone morphogenetic protein 8a.
    
  0.859
ENSACLP00000033904
Anti-Mullerian hormone.
    
  0.859
ENSACLP00000025423
Growth differentiation factor 7.
    
 0.857
ENSACLP00000025583
Growth differentiation factor 7.
    
 0.857
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.