STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd9Major facilitator superfamily domain containing 9. (477 aa)    
Predicted Functional Partners:
aagab
Alpha and gamma adaptin binding protein.
      
 0.538
mfsd10
Major facilitator superfamily domain containing 10.
      
0.538
svopl
SVOP-like.
   
  
 0.536
slc46a2
Solute carrier family 46 member 2.
      
 0.534
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.534
unc93a
Unc-93 homolog A.
      
 0.533
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.525
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
      
 0.522
ENSACLP00000003604
Inositol polyphosphate-4-phosphatase type I Aa.
      
 0.507
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.493
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.