Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HARBI1Harbinger transposase derived 1. (343 aa)    
Predicted Functional Partners:
naif1
Nuclear apoptosis inducing factor 1.
    
 
 0.919
prorp
Protein only RNase P catalytic subunit.
      
 0.727
ENSACLP00000008037
Zgc:113436.
      
 0.713
pgbd5
PiggyBac transposable element derived 5.
      
 0.702
shpk
Sedoheptulokinase.
      
 0.696
ENSACLP00000026514
Zinc finger, MYM-type 2.
      
 0.654
ENSACLP00000009680
Phosphatidylinositol glycan anchor biosynthesis, class L.
   
    0.625
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.608
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.591
ENSACLP00000034959
Uncharacterized protein.
    
 0.591
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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