STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inavaInnate immunity activator a. (577 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.668
LOC113035263
FERM domain containing 1.
    
 0.633
frmd6
FERM domain containing 6.
    
 0.633
LOC113022066
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.614
ENSACLP00000019443
Uncharacterized protein.
    
 0.614
LOC113013423
Uncharacterized protein.
    
 0.614
trip12
Thyroid hormone receptor interactor 12.
    
 0.576
LOC113031828
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.552
ENSACLP00000019430
PDZ domain-containing protein.
    
  0.549
ENSACLP00000024298
Membrane associated guanylate kinase, WW and PDZ domain containing 1b.
    
  0.549
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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