lmbrd1 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

lmbrd1

LMBR1 domain containing 1. (538 aa)

Predicted Functional Partners:

abcd4

0.954

abcd3

0.815

LOC113008593

0.766

LOC113013254

0.766

mmachc

0.576

mmaa

0.576

mtr

0.538

mmab

0.538

mtrr

0.537

mmut

0.536

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC113008593	LOC113013254	ENSACLP00000008620	ENSACLP00000020450	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 1.	0.841
LOC113008593	abcd3	ENSACLP00000008620	ENSACLP00000008992	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.924
LOC113008593	abcd4	ENSACLP00000008620	ENSACLP00000019639	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 4.	0.905
LOC113008593	lmbrd1	ENSACLP00000008620	ENSACLP00000003406	ATP-binding cassette, sub-family D (ALD), member 2.	LMBR1 domain containing 1.	0.766
LOC113013254	LOC113008593	ENSACLP00000020450	ENSACLP00000008620	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 2.	0.841
LOC113013254	abcd3	ENSACLP00000020450	ENSACLP00000008992	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.918
LOC113013254	abcd4	ENSACLP00000020450	ENSACLP00000019639	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 4.	0.894
LOC113013254	lmbrd1	ENSACLP00000020450	ENSACLP00000003406	ATP-binding cassette, sub-family D (ALD), member 1.	LMBR1 domain containing 1.	0.766
abcd3	LOC113008593	ENSACLP00000008992	ENSACLP00000008620	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 2.	0.924
abcd3	LOC113013254	ENSACLP00000008992	ENSACLP00000020450	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 1.	0.918
abcd3	abcd4	ENSACLP00000008992	ENSACLP00000019639	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 4.	0.849
abcd3	lmbrd1	ENSACLP00000008992	ENSACLP00000003406	ATP-binding cassette, sub-family D (ALD), member 3a.	LMBR1 domain containing 1.	0.815
abcd3	mmut	ENSACLP00000008992	ENSACLP00000037843	ATP-binding cassette, sub-family D (ALD), member 3a.	Methylmalonyl CoA mutase.	0.459
abcd4	LOC113008593	ENSACLP00000019639	ENSACLP00000008620	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 2.	0.905
abcd4	LOC113013254	ENSACLP00000019639	ENSACLP00000020450	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 1.	0.894
abcd4	abcd3	ENSACLP00000019639	ENSACLP00000008992	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.849
abcd4	lmbrd1	ENSACLP00000019639	ENSACLP00000003406	ATP-binding cassette, sub-family D (ALD), member 4.	LMBR1 domain containing 1.	0.954
abcd4	mmut	ENSACLP00000019639	ENSACLP00000037843	ATP-binding cassette, sub-family D (ALD), member 4.	Methylmalonyl CoA mutase.	0.546
abcd4	mtr	ENSACLP00000019639	ENSACLP00000002217	ATP-binding cassette, sub-family D (ALD), member 4.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.411
lmbrd1	LOC113008593	ENSACLP00000003406	ENSACLP00000008620	LMBR1 domain containing 1.	ATP-binding cassette, sub-family D (ALD), member 2.	0.766