STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013546Uncharacterized protein. (391 aa)    
Predicted Functional Partners:
chp1
Calcineurin-like EF-hand protein 1.
    
  0.625
prkg2
cGMP-dependent protein kinase.
   
 0.621
ENSACLP00000021285
Si:dkey-121j17.5; Belongs to the protein kinase superfamily.
   
 0.621
LOC113035556
cGMP-dependent protein kinase.
   
 0.621
ENSACLP00000025547
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.621
ENSACLP00000002678
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.595
ENSACLP00000017448
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.595
ENSACLP00000032620
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.595
ENSACLP00000040819
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.595
ENSACLP00000041073
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.595
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.