ENSACLP00000003429 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000003429

RWD domain-containing protein. (141 aa)

Predicted Functional Partners:

eif2s1

0.983

ENSACLP00000018362

0.924

ENSACLP00000004396

0.907

rptor

0.904

hars1

0.900

ENSACLP00000016234

0.895

eif2ak3

0.878

eif2ak1

0.869

EIF2AK4

0.865

mlst8

0.859

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF2AK4	ENSACLP00000003429	ENSACLP00000003454	ENSACLP00000003429	Eukaryotic translation initiation factor 2 alpha kinase 4.	RWD domain-containing protein.	0.865
EIF2AK4	ENSACLP00000004396	ENSACLP00000003454	ENSACLP00000004396	Eukaryotic translation initiation factor 2 alpha kinase 4.	Aspartyl-tRNA synthetase 2, mitochondrial.	0.907
EIF2AK4	ENSACLP00000016234	ENSACLP00000003454	ENSACLP00000016234	Eukaryotic translation initiation factor 2 alpha kinase 4.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.895
EIF2AK4	ENSACLP00000018362	ENSACLP00000003454	ENSACLP00000018362	Eukaryotic translation initiation factor 2 alpha kinase 4.	Serine/threonine-protein kinase TOR.	0.924
EIF2AK4	eif2ak1	ENSACLP00000003454	ENSACLP00000021883	Eukaryotic translation initiation factor 2 alpha kinase 4.	Eukaryotic translation initiation factor 2-alpha kinase 1.	0.869
EIF2AK4	eif2ak3	ENSACLP00000003454	ENSACLP00000018521	Eukaryotic translation initiation factor 2 alpha kinase 4.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.878
EIF2AK4	eif2s1	ENSACLP00000003454	ENSACLP00000036230	Eukaryotic translation initiation factor 2 alpha kinase 4.	Eukaryotic translation initiation factor 2, subunit 1 alpha b.	0.983
EIF2AK4	hars1	ENSACLP00000003454	ENSACLP00000009454	Eukaryotic translation initiation factor 2 alpha kinase 4.	Histidyl-tRNA synthetase.	0.900
EIF2AK4	mlst8	ENSACLP00000003454	ENSACLP00000023854	Eukaryotic translation initiation factor 2 alpha kinase 4.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.859
EIF2AK4	rptor	ENSACLP00000003454	ENSACLP00000015112	Eukaryotic translation initiation factor 2 alpha kinase 4.	Regulatory associated protein of MTOR, complex 1.	0.904
ENSACLP00000003429	EIF2AK4	ENSACLP00000003429	ENSACLP00000003454	RWD domain-containing protein.	Eukaryotic translation initiation factor 2 alpha kinase 4.	0.865
ENSACLP00000003429	ENSACLP00000004396	ENSACLP00000003429	ENSACLP00000004396	RWD domain-containing protein.	Aspartyl-tRNA synthetase 2, mitochondrial.	0.907
ENSACLP00000003429	ENSACLP00000016234	ENSACLP00000003429	ENSACLP00000016234	RWD domain-containing protein.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.895
ENSACLP00000003429	ENSACLP00000018362	ENSACLP00000003429	ENSACLP00000018362	RWD domain-containing protein.	Serine/threonine-protein kinase TOR.	0.924
ENSACLP00000003429	eif2ak1	ENSACLP00000003429	ENSACLP00000021883	RWD domain-containing protein.	Eukaryotic translation initiation factor 2-alpha kinase 1.	0.869
ENSACLP00000003429	eif2ak3	ENSACLP00000003429	ENSACLP00000018521	RWD domain-containing protein.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.878
ENSACLP00000003429	eif2s1	ENSACLP00000003429	ENSACLP00000036230	RWD domain-containing protein.	Eukaryotic translation initiation factor 2, subunit 1 alpha b.	0.983
ENSACLP00000003429	hars1	ENSACLP00000003429	ENSACLP00000009454	RWD domain-containing protein.	Histidyl-tRNA synthetase.	0.900
ENSACLP00000003429	mlst8	ENSACLP00000003429	ENSACLP00000023854	RWD domain-containing protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.859
ENSACLP00000003429	rptor	ENSACLP00000003429	ENSACLP00000015112	RWD domain-containing protein.	Regulatory associated protein of MTOR, complex 1.	0.904