Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021292TLC domain containing 4b. (270 aa)    
Predicted Functional Partners:
ENSACLP00000036302
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.749
ENSACLP00000032869
Uncharacterized protein.
    
 
 0.624
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.609
rassf3
Ras association domain family member 3.
      
 0.606
ENSACLP00000015913
Nocturnin a.
    
 
 0.552
ENSACLP00000028496
Uncharacterized protein.
    
   0.535
ENSACLP00000028563
Pumilio RNA-binding family member 1.
    
   0.535
pum2
Pumilio RNA-binding family member 2.
    
   0.535
LOC113007379
Si:dkey-69o16.5.
      
 0.504
nrip2
Nuclear receptor interacting protein 2.
      
 0.495
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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