Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plekhj1Pleckstrin homology domain containing, family J member 1. (158 aa)    
Predicted Functional Partners:
LOC113012292
Myc target 1b.
      
 0.721
ENSACLP00000009703
Fanconi_A_N domain-containing protein.
    
 0.674
prepl
Prolyl endopeptidase like.
      
 0.674
ENSACLP00000036507
G patch domain containing 1.
      
 0.668
LOC113032793
Zinc finger protein 574.
    
 
 0.664
ENSACLP00000003702
Golgi glycoprotein 1a.
      
 0.637
LOC113013457
Golgi glycoprotein 1b.
      
 0.637
camkmt
Calmodulin-lysine N-methyltransferase.
      
 0.637
ncoa5
Nuclear receptor coactivator 5.
    
 0.636
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
    
 
 0.630
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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