STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhj1Pleckstrin homology domain containing, family J member 1. (158 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.841
ENSACLP00000009703
Fanconi_A_N domain-containing protein.
    
 0.604
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.544
fancf
FA complementation group F.
    
 0.536
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.519
LOC113032793
Zinc finger protein 574.
    
 
 0.511
LOC113012292
Myc target 1b.
      
 0.502
LOC113015000
NTF2 domain-containing protein.
    
 0.493
nutf2
Nuclear transport factor 2.
    
 0.493
prepl
Prolyl endopeptidase like.
      
 0.483
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.