Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000003446Low density lipoprotein receptor-related protein 1Aa. (4456 aa)    
Predicted Functional Partners:
ENSACLP00000041064
Apolipoprotein Eb.
    
 0.979
LOC113023685
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.956
ENSACLP00000021370
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.956
LOC113010181
Calreticulin.
    
 0.892
LOC113008758
Calreticulin.
    
 0.892
ENSACLP00000034377
Calreticulin.
    
 0.892
gulp1
PID domain-containing protein.
    
  0.883
LOC113022204
C1q domain-containing protein.
     
  0.857
LOC113022203
C1q domain-containing protein.
     
  0.857
LOC113022202
C1q domain-containing protein.
     
  0.857
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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