STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003461Roundabout, axon guidance receptor, homolog 3 (Drosophila). (1441 aa)    
Predicted Functional Partners:
NELL1
Neural EGFL like 1.
    
 0.948
nell2
Neural EGFL like 2a.
    
 0.948
ENSACLP00000003216
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
    
0.747
LOC113030223
Uncharacterized protein.
    
0.747
ENSACLP00000003225
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
    
0.745
LOC113035891
Uncharacterized protein.
  
 
0.742
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
    
0.736
ENSACLP00000012038
Uncharacterized protein.
    
0.736
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
     
 0.629
LOC113020561
Notch receptor 3.
   
  0.562
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.