Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000003469Si:ch1073-174d20.2; Belongs to the AAA ATPase family. (666 aa)    
Predicted Functional Partners:
phb
Prohibitin.
  
 0.940
LOC113009519
Prohibitin.
  
 0.888
PHB2
Prohibitin.
  
 0.888
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 
 0.876
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
 
 0.874
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
 
 
 0.871
mrpl13
Mitochondrial ribosomal protein L13.
  
 
 0.842
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
0.837
ENSACLP00000019588
OMA1 zinc metallopeptidase.
  
 0.836
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
 
 
 0.834
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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