Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bmfUncharacterized protein. (170 aa)    
Predicted Functional Partners:
bcl2l1
BCL2 like 1.
    
 0.962
LOC113029596
Zgc:153993.
    
 0.938
LOC113034155
Dynein light chain.
    
 0.932
dnal4
Dynein light chain.
    
 0.928
LOC113030325
Dynein light chain.
    
 0.922
DYNLL2
Dynein light chain.
    
 0.921
ENSACLP00000006599
MCL1 apoptosis regulator, BCL2 family member b.
    
 0.900
LOC113029594
BH4_2 domain-containing protein.
    
 0.885
bcl2
BCL2 apoptosis regulator b.
    
 0.885
ENSACLP00000006047
Mitogen-activated protein kinase.
    
 0.786
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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