STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmfUncharacterized protein. (170 aa)    
Predicted Functional Partners:
dnal4
Dynein light chain.
    
 0.872
LOC113029594
BH4_2 domain-containing protein.
    
 0.869
bcl2
BCL2 apoptosis regulator b.
    
 0.869
bcl2l1
BCL2 like 1.
    
 0.829
ENSACLP00000006599
MCL1 apoptosis regulator, BCL2 family member b.
    
 0.825
DYNLL2
Dynein light chain.
    
 0.799
LOC113034155
Dynein light chain.
    
 0.799
LOC113030325
Dynein light chain.
    
 0.799
LOC113029596
Zgc:153993.
    
 0.715
LOC113036079
Mitogen-activated protein kinase.
    
 0.709
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.