Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
unc50Unc-50 homolog (C. elegans). (265 aa)    
Predicted Functional Partners:
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 
 0.777
LOC113026374
RIC3 domain-containing protein.
      
 0.767
arfrp1
ADP-ribosylation factor related protein 1.
    
 
 0.762
ENSACLP00000028937
A kinase (PRKA) anchor protein 17A.
      
 0.692
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.687
yif1a
Yip1 interacting factor homolog A (S. cerevisiae).
   
  
 0.658
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
      
 0.658
uxs1
UDP-glucuronate decarboxylase 1.
      
 0.655
ENSACLP00000035465
NIPA magnesium transporter 2.
      
 0.655
ARHGAP6-2
Rho GTPase activating protein 6.
      
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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