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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003513PTPRF interacting protein alpha 1. (1294 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
    
 0.992
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.992
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.889
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.889
LOC113023671
PPFIA binding protein 2a.
   
0.749
PPFIBP2
PPFIA binding protein 2.
   
0.749
LOC113008773
Uncharacterized protein.
   
0.749
LOC113026962
PPFIA binding protein 1b.
   
0.749
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
    
 0.744
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 
 0.690
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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