Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003516Uncharacterized protein. (1307 aa)    
Predicted Functional Partners:
ubac1
UBA domain containing 1.
      
 0.497
LOC113037365
Uncharacterized protein.
  
   
 0.492
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
  
 0.482
ENSACLP00000037862
Ceramide kinase-like.
      
 0.468
LOC113019454
RING-type domain-containing protein.
  
   
 0.454
LOC113019458
Uncharacterized protein.
  
     0.425
ENSACLP00000030527
Si:ch211-25d12.7.
      
 0.413
LOC113026087
ANK_REP_REGION domain-containing protein.
  
     0.401
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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