STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003543Dachsous cadherin-related 1b. (3246 aa)    
Predicted Functional Partners:
ENSACLP00000001125
Four-jointed box kinase 1.
   
 0.765
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.687
LOC113021483
Uncharacterized protein.
    
 0.686
LOC113023765
Junction plakoglobin a.
    
 0.686
LOC113014539
Uncharacterized protein.
    
 0.686
fat2
FAT atypical cadherin 2.
   
0.636
fat1
FAT atypical cadherin 1a.
   
0.636
ENSACLP00000003449
Catenin (cadherin-associated protein), alpha 1.
    
 0.617
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.617
LOC113035484
Uncharacterized protein.
    
 0.617
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.