STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol11Nucleolar protein 11. (720 aa)    
Predicted Functional Partners:
wdr43
WD repeat domain 43.
   
 0.988
utp4
UTP4 small subunit processome component.
    
 0.986
ENSACLP00000014943
UTP15 small subunit processome component.
   
 0.984
wdr75
WD repeat domain 75.
   
 0.983
utp6
UTP6 small subunit processome component.
   
 0.957
wdr3
WD repeat domain 3.
   
 0.953
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.953
ENSACLP00000011936
UTP20 small subunit processome component.
   
 0.948
ENSACLP00000025811
U3snoRNP10 domain-containing protein.
   
 0.947
ENSACLP00000025841
BP28CT domain-containing protein.
   
 0.947
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.