STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003571Ubiquitin carboxyl-terminal hydrolase. (893 aa)    
Predicted Functional Partners:
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.832
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.832
RPS27A
Ribosomal protein S27a.
    
 0.824
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.765
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
     
 0.737
LOC113031262
Androgen receptor.
    
 0.735
LOC113034111
Uncharacterized protein.
    
 0.735
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
 0.732
ccna1
Cyclin A1; Belongs to the cyclin family.
    
 0.692
LOC113031225
Cyclin A2; Belongs to the cyclin family.
    
 0.687
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.