STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003577Uncharacterized protein. (2244 aa)    
Predicted Functional Partners:
ENSACLP00000035790
Zgc:172302.
  
  
 
0.851
LOC113023919
ATP-binding cassette, sub-family A (ABC1), member 1A.
  
  
 
0.818
ENSACLP00000022922
ATP binding cassette subfamily A member 1.
  
  
 
0.818
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.752
LOC113032020
Uncharacterized protein.
    
 0.698
LOC113032148
Uncharacterized protein.
    
 0.698
LOC113035339
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.668
ENSACLP00000040985
ATP-binding cassette, sub-family A (ABC1), member 3b.
  
 
0.666
ENSACLP00000033251
2-epi-5-epi-valiolone synthase.
     
 0.631
ENSACLP00000022314
ATP-binding cassette, sub-family A (ABC1), member 4a.
  
  
 
0.617
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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