Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003577Uncharacterized protein. (2244 aa)    
Predicted Functional Partners:
ENSACLP00000035790
Zgc:172302.
     
  0.872
LOC113033004
Rho related BTB domain containing 4.
    
 0.871
trip12
Thyroid hormone receptor interactor 12.
     
 0.864
LOC113032020
Uncharacterized protein.
    
 0.860
LOC113032148
Uncharacterized protein.
    
 0.860
LOC113023919
ATP-binding cassette, sub-family A (ABC1), member 1A.
     
  0.856
ENSACLP00000022922
ATP binding cassette subfamily A member 1.
     
  0.856
ENSACLP00000026433
ATP-binding cassette, sub-family A (ABC1), member 2.
     
  0.856
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.832
LOC113027755
Rac family small GTPase 3b.
    
 0.813
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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