STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003584Uncharacterized protein. (1269 aa)    
Predicted Functional Partners:
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.939
LOC113021929
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.939
nectin1
Nectin cell adhesion molecule 1b.
    
 0.934
LOC113030602
F11 receptor, tandem duplicate 1.
    
 0.929
LOC113021951
Uncharacterized protein.
    
 0.929
ENSACLP00000027191
Uncharacterized protein.
   
 0.924
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
   
 0.924
LOC113008802
Uncharacterized protein.
    
 0.922
LOC113036070
Uncharacterized protein.
    
 0.908
mras
Muscle RAS oncogene homolog.
    
 0.908
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.