STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113009932Rho GTPase activating protein 12a. (895 aa)    
Predicted Functional Partners:
ENSACLP00000016425
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.699
ENSACLP00000020086
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.699
LOC113018513
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.699
ENSACLP00000031827
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.699
ENSACLP00000035545
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.699
LOC113025776
Ras homolog family member F.
    
 0.634
LOC113012818
Uncharacterized protein.
    
 0.619
rnd1
Rho family GTPase 1b.
    
 0.619
LOC113012962
Uncharacterized protein.
    
 0.619
ENSACLP00000012848
Uncharacterized protein.
    
 0.619
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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