Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arfrp1ADP-ribosylation factor related protein 1. (207 aa)    
Predicted Functional Partners:
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
 
 0.972
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.950
ENSACLP00000036802
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.945
ENSACLP00000036839
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.945
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.937
ENSACLP00000038605
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.907
ENSACLP00000016878
RAB6A, member RAS oncogene family.
    
 0.899
LOC113007782
RAB41, member RAS oncogene family.
    
 0.899
LOC113016723
RAB6B, member RAS oncogene family a.
    
 0.899
LOC113011267
RAB6B, member RAS oncogene family.
    
 0.899
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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