Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adgrb3Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family. (1537 aa)    
Predicted Functional Partners:
LOC113007418
RAN binding protein 2.
   
 0.943
elmo2
Engulfment and cell motility 2.
    
 0.910
LOC113015157
Engulfment and cell motility 1.
    
 0.910
kpnb1
Karyopherin (importin) beta 1.
   
 0.909
LOC113027161
Engulfment and cell motility 3.
    
 0.871
rangap1
RAN GTPase activating protein 1a.
   
 0.852
ENSACLP00000028094
Ran GTPase activating protein 1b.
   
 0.852
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
    
 0.831
nup153
Nucleoporin 153.
    
 0.785
ENSACLP00000034336
CSE1 chromosome segregation 1-like (yeast).
   
 
 0.783
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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