STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003633SEFIR domain-containing protein. (577 aa)    
Predicted Functional Partners:
ENSACLP00000012345
Uncharacterized protein.
    
 0.948
ENSACLP00000037794
Uncharacterized protein.
    
 0.940
ENSACLP00000037857
Interleukin 17a/f1.
    
 0.940
ENSACLP00000029407
SEFIR domain-containing protein.
   
 0.926
ENSACLP00000017660
Uncharacterized protein.
    
 0.856
il17ra
SEFIR domain-containing protein.
  
  
 
0.856
ENSACLP00000037776
Uncharacterized protein.
    
 0.856
ENSACLP00000037851
annotation not available
    
 0.856
ENSACLP00000008625
Uncharacterized protein.
     
 0.827
LOC113033717
A-Raf proto-oncogene, serine/threonine kinase.
   
  0.578
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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