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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012818Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
    
 0.947
ENSACLP00000012873
SH3 domain-containing protein.
    
 0.947
ENSACLP00000014175
Intersectin 2b.
    
 0.947
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
  
 0.938
rock2
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
  
 0.938
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.929
LOC113014449
Uncharacterized protein.
   
 0.929
arhgap5
Rho GTPase activating protein 5.
    
 0.928
LOC113030215
Rho GTPase activating protein 35b.
    
 0.928
arhgap35
Rho GTPase activating protein 35a.
    
 0.928
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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