Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
ENSACLP00000003641Tetraspanin. (224 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.606
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.606
mst1r
Macrophage stimulating 1 receptor b.
    
  0.606
tspan14
Tetraspanin.
      
 0.487
tspan31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
      
 0.476
oxa1l
OXA1L mitochondrial inner membrane protein.
      
 0.423
LOC113021297
RAB3D, member RAS oncogene family, b.
      
 0.419
ENSACLP00000023721
Small nuclear ribonucleoprotein polypeptide F.
      
 0.417
ENSACLP00000027746
Uncharacterized protein.
      
 0.415
LOC113023419
DAN domain family, member 5.
      
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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