STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fez1Fasciculation and elongation protein zeta 1 (zygin I). (403 aa)    
Predicted Functional Partners:
scoc
Short coiled-coil protein a.
   
 
 0.829
ulk3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
    
 
 0.511
ENSACLP00000034312
Uncharacterized protein.
    
 
 0.507
cnpy2
Canopy FGF signaling regulator 2.
      
 0.493
ENSACLP00000021832
Huntingtin.
    
   0.441
ENSACLP00000040283
Trafficking protein, kinesin binding 2.
    
 
 0.433
LSM10
LSM10, U7 small nuclear RNA associated.
   
  
 0.423
ENSACLP00000014128
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
    0.422
LOC113010145
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.415
ENSACLP00000016182
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.415
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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