STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fez1Fasciculation and elongation protein zeta 1 (zygin I). (403 aa)    
Predicted Functional Partners:
scoc
Short coiled-coil protein a.
   
 
 0.963
ENSACLP00000021832
Huntingtin.
    
   0.825
ENSACLP00000013297
Uncharacterized protein.
    
   0.750
ulk3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
    
 
 0.675
cnpy2
Canopy FGF signaling regulator 2.
      
 0.662
kiaa0513
Zgc:91860.
      
 0.655
LSM10
LSM10, U7 small nuclear RNA associated.
      
 0.655
ak3
GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
      
 0.655
ENSACLP00000040283
Trafficking protein, kinesin binding 2.
    
 
 0.640
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
      
 0.602
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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