Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113016017Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (173 aa)    
Predicted Functional Partners:
slc6a1
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.709
otos
Otospiralin.
      
 0.677
stx16
Syntaxin 16; Belongs to the syntaxin family.
      
 0.654
ENSACLP00000001294
Somatolactin alpha.
   
    0.571
LOC113019958
Growth hormone 1.
   
    0.571
ENSACLP00000006224
Uncharacterized protein.
      
 0.540
LOC113036456
Lens intrinsic membrane protein 2.3.
      
 0.540
ENSACLP00000010817
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.498
mip
Major intrinsic protein of lens fiber a; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.475
ENSACLP00000002816
Uncharacterized protein.
      
 0.425
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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