STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxnl2Nucleoredoxin like 2. (191 aa)    
Predicted Functional Partners:
ENSACLP00000018114
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.449
LOC113018910
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.449
LOC113018911
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.449
ENSACLP00000001688
Thioredoxin 2.
    
 
 0.442
dvl2
Dishevelled segment polarity protein 2.
    
 
 0.418
dvl3
Dishevelled segment polarity protein 3a.
    
 
 0.418
rnpepl1
Arginyl aminopeptidase like 1.
    
 
 0.418
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.407
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.402
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.