Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nxnl2Nucleoredoxin like 2. (191 aa)    
Predicted Functional Partners:
ENSACLP00000017910
FLII actin remodeling protein.
      
 0.672
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.639
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.603
txndc15
Thioredoxin domain containing 15.
      
 0.592
stum
Stum, mechanosensory transduction mediator homolog.
      
 0.555
ENSACLP00000018114
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.517
LOC113018910
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.517
LOC113018911
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.517
nudcd1
NudC domain containing 1.
    
   0.492
CCDC66
Coiled-coil domain containing 66.
      
 0.482
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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