Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc25Tetratricopeptide repeat domain 25. (490 aa)    
Predicted Functional Partners:
ENSACLP00000016170
Armadillo repeat containing 4.
  
 
 0.980
ENSACLP00000029276
Uncharacterized protein.
   
 0.979
ENSACLP00000023325
Coiled-coil domain containing 114.
   
 
 0.965
drc7
Uncharacterized protein.
  
 
 0.958
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.953
cfap52
Cilia and flagella associated protein 52.
   
 0.947
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 0.942
ENSACLP00000011533
NME/NM23 family member 5; Belongs to the NDK family.
  
 0.933
ENSACLP00000011692
NME/NM23 family member 5; Belongs to the NDK family.
  
 0.933
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.928
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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