ENSACLP00000003702 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000003702

Golgi glycoprotein 1a. (1199 aa)

Predicted Functional Partners:

LOC113015921

0.904

ENSACLP00000037026

0.904

ENSACLP00000037114

0.904

ENSACLP00000037295

0.904

LOC113027059

0.792

OSBPL8

0.792

aplp2

0.689

tm9sf2

0.671

tm9sf4

0.668

ENSACLP00000001532

0.655

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001532	ENSACLP00000003702	ENSACLP00000001532	ENSACLP00000003702	Zgc:153240.	Golgi glycoprotein 1a.	0.655
ENSACLP00000003702	ENSACLP00000001532	ENSACLP00000003702	ENSACLP00000001532	Golgi glycoprotein 1a.	Zgc:153240.	0.655
ENSACLP00000003702	ENSACLP00000037026	ENSACLP00000003702	ENSACLP00000037026	Golgi glycoprotein 1a.	Uncharacterized protein.	0.904
ENSACLP00000003702	ENSACLP00000037114	ENSACLP00000003702	ENSACLP00000037114	Golgi glycoprotein 1a.	Uncharacterized protein.	0.904
ENSACLP00000003702	ENSACLP00000037295	ENSACLP00000003702	ENSACLP00000037295	Golgi glycoprotein 1a.	Uncharacterized protein.	0.904
ENSACLP00000003702	LOC113015921	ENSACLP00000003702	ENSACLP00000036764	Golgi glycoprotein 1a.	Selectin P.	0.904
ENSACLP00000003702	LOC113027059	ENSACLP00000003702	ENSACLP00000004369	Golgi glycoprotein 1a.	Oxysterol-binding protein; Belongs to the OSBP family.	0.792
ENSACLP00000003702	OSBPL8	ENSACLP00000003702	ENSACLP00000025707	Golgi glycoprotein 1a.	Oxysterol-binding protein; Belongs to the OSBP family.	0.792
ENSACLP00000003702	aplp2	ENSACLP00000003702	ENSACLP00000032302	Golgi glycoprotein 1a.	Amyloid beta (A4) precursor-like protein 2.	0.689
ENSACLP00000003702	tm9sf2	ENSACLP00000003702	ENSACLP00000000058	Golgi glycoprotein 1a.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.671
ENSACLP00000003702	tm9sf4	ENSACLP00000003702	ENSACLP00000009756	Golgi glycoprotein 1a.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.668
ENSACLP00000037026	ENSACLP00000003702	ENSACLP00000037026	ENSACLP00000003702	Uncharacterized protein.	Golgi glycoprotein 1a.	0.904
ENSACLP00000037026	aplp2	ENSACLP00000037026	ENSACLP00000032302	Uncharacterized protein.	Amyloid beta (A4) precursor-like protein 2.	0.518
ENSACLP00000037114	ENSACLP00000003702	ENSACLP00000037114	ENSACLP00000003702	Uncharacterized protein.	Golgi glycoprotein 1a.	0.904
ENSACLP00000037114	aplp2	ENSACLP00000037114	ENSACLP00000032302	Uncharacterized protein.	Amyloid beta (A4) precursor-like protein 2.	0.518
ENSACLP00000037295	ENSACLP00000003702	ENSACLP00000037295	ENSACLP00000003702	Uncharacterized protein.	Golgi glycoprotein 1a.	0.904
ENSACLP00000037295	aplp2	ENSACLP00000037295	ENSACLP00000032302	Uncharacterized protein.	Amyloid beta (A4) precursor-like protein 2.	0.518
LOC113015921	ENSACLP00000003702	ENSACLP00000036764	ENSACLP00000003702	Selectin P.	Golgi glycoprotein 1a.	0.904
LOC113015921	aplp2	ENSACLP00000036764	ENSACLP00000032302	Selectin P.	Amyloid beta (A4) precursor-like protein 2.	0.518
LOC113027059	ENSACLP00000003702	ENSACLP00000004369	ENSACLP00000003702	Oxysterol-binding protein; Belongs to the OSBP family.	Golgi glycoprotein 1a.	0.792