STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031222FH2 domain containing 3. (783 aa)    
Predicted Functional Partners:
LOC113017775
Profilin; Belongs to the profilin family.
    
 0.752
LOC113010667
Profilin; Belongs to the profilin family.
    
 0.752
pfn2
Profilin; Belongs to the profilin family.
    
 0.752
LOC113012818
Uncharacterized protein.
    
 0.708
rnd1
Rho family GTPase 1b.
    
 0.708
LOC113012962
Uncharacterized protein.
    
 0.708
ENSACLP00000012848
Uncharacterized protein.
    
 0.708
LOC113013171
Uncharacterized protein.
    
 0.708
LOC113022452
Ras homolog gene family, member Ab.
    
 0.708
LOC113022007
Ras homolog family member Cb.
    
 0.708
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.