STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113025599Betacellulin, epidermal growth factor family member. (194 aa)    
Predicted Functional Partners:
LOC113010022
Receptor protein-tyrosine kinase.
    
 0.936
LOC113029559
Receptor protein-tyrosine kinase.
    
 0.923
ENSACLP00000014200
Receptor protein-tyrosine kinase.
    
 0.914
LOC113007667
Receptor protein-tyrosine kinase.
    
 0.902
ENSACLP00000036859
Uncharacterized protein.
    
 0.902
LOC113013517
Erb-b2 receptor tyrosine kinase 3b.
    
 0.886
ENSACLP00000015432
Epidermal growth factor.
     
0.822
LOC113034822
Heparin-binding EGF-like growth factor a.
     
0.817
LOC113034337
EGF-like domain-containing protein.
     
 0.809
LOC113033702
EGF-like domain-containing protein.
     
 0.806
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.