Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003740Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
   0.732
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.728
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.717
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 
 0.684
LOC113026542
Golgi transport 1Bb.
    
 
 0.662
GOLT1B
Golgi transport 1Ba.
    
 
 0.662
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 
 0.545
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 
 0.545
ENSACLP00000036802
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
   0.515
ENSACLP00000036839
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
   0.515
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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