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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113024456ATP-binding cassette, sub-family G (WHITE), member 2b. (616 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.890
ENSACLP00000034054
ATP-binding cassette, sub-family G (WHITE), member 2d.
  
  
 
0.822
LOC113035339
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.668
ENSACLP00000033251
2-epi-5-epi-valiolone synthase.
   
 
 0.664
ENSACLP00000012822
Uncharacterized protein.
  
0.659
ENSACLP00000013007
ABC transmembrane type-1 domain-containing protein.
  
 0.659
ENSACLP00000013015
ABC transporter domain-containing protein.
  
 0.659
ENSACLP00000013581
Uncharacterized protein.
  
 0.659
atp5f1c
ATP synthase subunit gamma.
   
   0.645
LOC113032020
Uncharacterized protein.
   
 0.635
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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