Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003743One cut domain family member. (490 aa)    
Predicted Functional Partners:
orc3
Origin recognition complex, subunit 3.
    
   0.621
ENSACLP00000008361
MAD2 mitotic arrest deficient-like 1 (yeast).
    
   0.492
ENSACLP00000008418
MAD2 mitotic arrest deficient-like 1 (yeast).
    
   0.492
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.471
WDR7
WD repeat domain 7.
      
 0.470
foxa2
Forkhead box A2.
  
 
 
 0.443
LOC113026082
Cyclin G2; Belongs to the cyclin family.
    
 
 0.433
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.433
fam214a
Family with sequence similarity 214 member A.
      
 0.413
pdx1
Pancreatic and duodenal homeobox 1.
    
 0.408
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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