STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003757Vang-like protein. (554 aa)    
Predicted Functional Partners:
PRICKLE1
Prickle homolog 1a.
    
 0.961
LOC113008915
Prickle homolog 1b.
    
 0.961
prickle2
Prickle homolog 2b.
    
 0.961
dvl2
Dishevelled segment polarity protein 2.
    
 0.957
dvl3
Dishevelled segment polarity protein 3a.
    
 0.952
rnpepl1
Arginyl aminopeptidase like 1.
    
 0.949
tes
Testis derived transcript (3 LIM domains).
    
 0.862
VANGL1
Vang-like protein.
  
  
0.838
LOC113008135
Vang-like protein.
  
  
 
0.829
fhl3
Four and a half LIM domains 3a.
    
 0.683
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.