STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003757Vang-like protein. (554 aa)    
Predicted Functional Partners:
PRICKLE1
Prickle homolog 1a.
    
 0.987
LOC113008915
Prickle homolog 1b.
    
 0.987
prickle2
Prickle homolog 2b.
    
 0.987
dvl2
Dishevelled segment polarity protein 2.
    
 0.986
dvl3
Dishevelled segment polarity protein 3a.
    
 0.973
rnpepl1
Arginyl aminopeptidase like 1.
    
 0.973
VANGL1
Vang-like protein.
     
  0.870
LOC113008135
Vang-like protein.
     
  0.854
ENSACLP00000007906
Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family.
    
 0.840
tes
Testis derived transcript (3 LIM domains).
    
 0.840
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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