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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcn3Reticulocalbin 3, EF-hand calcium binding domain. (317 aa)    
Predicted Functional Partners:
LOC113028596
Fam20C domain-containing protein.
    
  0.607
ENSACLP00000041544
FAM20C golgi associated secretory pathway kinase a.
    
  0.607
LOC113024615
Fam20C domain-containing protein.
    
  0.580
LOC113021114
Fam20C domain-containing protein.
    
  0.580
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.513
LOC113010181
Calreticulin.
   
 
 0.498
LOC113008758
Calreticulin.
   
 
 0.498
ENSACLP00000034377
Calreticulin.
   
 
 0.498
med25
Mediator complex subunit 25.
      
 0.459
ENSACLP00000003747
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.443
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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