STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc45a2Solute carrier family 45 member 2. (568 aa)    
Predicted Functional Partners:
foxd1
Forkhead box D1.
    
 
 0.686
ENSACLP00000007531
Proteasome subunit beta.
   
  
 0.655
ENSACLP00000001237
Forkhead box L1.
    
 
 0.633
herc3
HECT and RLD domain containing E3 ubiquitin protein ligase 3.
      
 0.605
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.534
TYR
Tyrosinase.
   
  
 0.524
MAF
MAF bZIP transcription factor; Belongs to the bZIP family.
      
 0.510
tyr
Tyrosinase.
   
  
 0.500
LOC113022617
Premelanosome protein a.
   
  
 0.481
ENSACLP00000035771
Oculocutaneous albinism II.
      
 0.472
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.